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Uncultivated Akkermansia muciniphila genome recovered from SRX200676

Identifiers
BioSample: SAMN08019340; Sample name: UBA8862; SRA: SRS2845745
Organism
Akkermansia muciniphila
cellular organisms; Bacteria; Pseudomonadati; PVC group; Verrucomicrobiota; Verrucomicrobiia; Verrucomicrobiales; Akkermansiaceae; Akkermansia
Package
Microbe; version 1.0
Attributes
isolateUBA8862
isolation sourcemetagenome
collection datenot applicable
geographic locationnot applicable
sample typemetagenomic assembly
metagenome sourcemetagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
genome_coverage27.77x
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
completeness_estimated97.96%
contamination_estimated0.00%
environmental_sampletrue
metagenomictrue
notemetagenome
valueThis BioSample is a metagenomic assembly obtained from the metagenome reads: SRR606249.
Description

Uncultivated genome recovered from an assembly of the SRX200676 metagenome.

BioProject
PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-11-13
Accession:
SAMN08019340
ID:
8019340

BioProject SRA Nucleotide

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