U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Acidovorax bacterium UBA10156 genome recovered from SRX764704

Identifiers
BioSample: SAMN08019580; Sample name: UBA10156; SRA: SRS2843607
Organism
Acidovorax sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax; unclassified Acidovorax
Package
Microbe; version 1.0
Attributes
isolateUBA10156
isolation sourcegroundwater
collection datenot applicable
geographic locationnot applicable
sample typemetagenomic assembly
metagenome sourcegroundwater metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
genome_coverage21.12x
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
completeness_estimated87.35%
contamination_estimated2.27%
environmental_sampletrue
metagenomictrue
notegroundwater metagenome
valueThis BioSample is a metagenomic assembly obtained from the groundwater metagenome reads: SRR1658344.
Description

Uncultivated genome recovered from an assembly of the SRX764704 metagenome.

BioProject
PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-11-13
Accession:
SAMN08019580
ID:
8019580

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center