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Uncultivated Treponema bacterium UBA9823 genome recovered from SRX290719

Identifiers
BioSample: SAMN08019654; Sample name: UBA9823; SRA: SRS2843109
Organism
Treponema sp.
cellular organisms; Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia; Spirochaetales; Treponemataceae; Treponema; unclassified Treponema
Package
Microbe; version 1.0
Attributes
isolateUBA9823
isolation sourcegut
collection datenot applicable
geographic locationnot applicable
sample typemetagenomic assembly
metagenome sourcegut metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
genome_coverage4.65x
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
completeness_estimated76.86%
contamination_estimated0.17%
environmental_sampletrue
metagenomictrue
notegut metagenome
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873609.
Description

Uncultivated genome recovered from an assembly of the SRX290719 metagenome.

BioProject
PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-11-13
Accession:
SAMN08019654
ID:
8019654

BioProject SRA Nucleotide

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