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Uncultivated Agrobacterium sp. UBA9670 genome recovered from SRX823126

Identifiers
BioSample: SAMN08019930; Sample name: UBA9670; SRA: SRS2843557
Organism
Agrobacterium sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; unclassified Agrobacterium
Package
Microbe; version 1.0
Attributes
isolateUBA9670
isolation sourceterrestrial
collection datenot applicable
geographic locationnot applicable
sample typemetagenomic assembly
metagenome sourceterrestrial metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
genome_coverage5.71x
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
completeness_estimated83.16%
contamination_estimated0.67%
environmental_sampletrue
metagenomictrue
noteterrestrial metagenome
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749743.
Description

Uncultivated genome recovered from an assembly of the SRX823126 metagenome.

BioProject
PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-11-13
Accession:
SAMN08019930
ID:
8019930

BioProject SRA Nucleotide

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