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Uncultivated Dehalococcoidia bacterium UBA11088 genome recovered from SRX211342

Identifiers
BioSample: SAMN08020123; Sample name: UBA11088; SRA: SRS2843547
Organism
Dehalococcoidia bacterium
cellular organisms; Bacteria; Bacillati; Chloroflexota; Dehalococcoidia; unclassified Dehalococcoidia
Package
Microbe; version 1.0
Attributes
isolateUBA11088
isolation sourcehydrocarbon
collection datenot applicable
geographic locationnot applicable
sample typemetagenomic assembly
metagenome sourcehydrocarbon metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
genome_coverage39.25x
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
completeness_estimated59.74%
contamination_estimated1.60%
environmental_sampletrue
metagenomictrue
notehydrocarbon metagenome
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR636569.
Description

Uncultivated genome recovered from an assembly of the SRX211342 metagenome.

BioProject
PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-11-13
Accession:
SAMN08020123
ID:
8020123

BioProject SRA Nucleotide

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