Microbe sample from Beggiatoa sp. - BioSample - NCBI

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Microbe sample from Beggiatoa sp.

Identifiers: BioSample: SAMN09638284; Sample name: Uncultivated Beggiatoa sp. HyVt-12 genome recovered from SRR5214151; SRA: SRS3740451

Organism: Beggiatoa sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa; unclassified Beggiatoa

Package: Microbe; version 1.0

Attributes

isolate	HyVt-12
isolation source	marine hydrothermal sediment
collection date	2009-11-30
geographic location	Mexico: Guaymas Basin, Gulf of California
sample type	metagenomic assembly
latitude and longitude	27.0078 N 111.4071 W
subsource note	Metagenome-assembled genome binned from sequencing reads available in SRR5214151
metagenome source	marine metagenome
assembly_method_and_version	DOE-JGI IMG deposited assembly (IMG Genome ID: 3300010330)
completeness_estimated	29.27
contamination_estimated	2.36
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	20.19
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA480137 metagenomes
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-07-11

Accession:: SAMN09638284
ID:: 9638284

BioProject SRA Nucleotide

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