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Microbe sample from Sedimenticola sp.

Identifiers
BioSample: SAMN09638646; Sample name: Uncultivated Sedimenticola sp. HyVt-446 genome recovered from SRR4453772; SRA: SRS3740411
Organism
Sedimenticola sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Chromatiales; Sedimenticolaceae; Sedimenticola; unclassified Sedimenticola
Package
Microbe; version 1.0
Attributes
isolateHyVt-446
isolation sourcerock sample from hydrothermal vent
collection date2005-05-21
geographic locationTonga: Lau Basin
sample typemetagenomic assembly
latitude and longitude
subsource noteMetagenome-assembled genome binned from sequencing reads available in SRR4453772
metagenome sourcehydrothermal vent metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated97.76
contamination_estimated2.79
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage51.69
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA480137 metagenomes
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-07-11
Accession:
SAMN09638646
ID:
9638646

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