Microbe sample from Gammaproteobacteria bacterium - BioSample - NCBI

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Microbe sample from Gammaproteobacteria bacterium

Identifiers: BioSample: SAMN09638734; Sample name: Uncultivated Gammaproteobacteria bacterium HyVt-525 genome recovered from SRR4453772; SRA: SRS3740033

Organism: Gammaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; unclassified Gammaproteobacteria

Package: Microbe; version 1.0

Attributes

isolate	HyVt-525
isolation source	rock sample from hydrothermal vent
collection date	2005-05-21
geographic location	Tonga: Lau Basin
sample type	metagenomic assembly
latitude and longitude	21.9892 S 176.5677 W
subsource note	Metagenome-assembled genome binned from sequencing reads available in SRR4453772
metagenome source	hydrothermal vent metagenome
assembly_method_and_version	MEGAHIT v1.1.2
completeness_estimated	91.17
contamination_estimated	3.93
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	9.97
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA480137 metagenomes
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-07-11

Accession:: SAMN09638734
ID:: 9638734

BioProject SRA Nucleotide

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