Microbe sample from Thiomicrospira sp. - BioSample - NCBI

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Microbe sample from Thiomicrospira sp.

Identifiers: BioSample: SAMN09638820; Sample name: Uncultivated Thiomicrospira sp. HyVt-602 genome recovered from SRR5149596; SRA: SRS3740620

Organism: Thiomicrospira sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira; unclassified Thiomicrospira

Package: Microbe; version 1.0

Attributes

isolate	HyVt-602
isolation source	terrigenous sediment of marine hydrothermal vent
collection date	2014-04-28
geographic location	China:Taiwan
sample type	metagenomic assembly
latitude and longitude	24.83499 N 121.96209 E
subsource note	Metagenome-assembled genome binned from sequencing reads available in SRR5149596
metagenome source	hydrothermal vent metagenome
assembly_method_and_version	MEGAHIT v1.1.2
completeness_estimated	58.51
contamination_estimated	7.17
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	10.37
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA480137 metagenomes
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-07-11

Accession:: SAMN09638820
ID:: 9638820

BioProject SRA Nucleotide

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