Microbe sample from Sediminispirochaeta sp. - BioSample - NCBI

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Microbe sample from Sediminispirochaeta sp.

Identifiers: BioSample: SAMN09639088; Sample name: Uncultivated Sediminispirochaeta sp. SpSt-1173 genome recovered from SRR5216255; SRA: SRS3740599

Organism: Sediminispirochaeta sp.
cellular organisms; Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; unclassified Sediminispirochaeta

Package: Microbe; version 1.0

Attributes

isolate	SpSt-1173
isolation source	hot spring sediment
collection date	2014-09-02
geographic location	USA: California
sample type	metagenomic assembly
latitude and longitude	39.0314 N 122.4323 W
subsource note	Metagenome-assembled genome binned from sequencing reads available in SRR5216255
metagenome source	sediment metagenome
assembly_method_and_version	DOE-JGI IMG deposited assembly (IMG Genome ID: 3300010291)
completeness_estimated	79.18
contamination_estimated	0.1
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	11.52
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA480137 metagenomes
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-07-11

Accession:: SAMN09639088
ID:: 9639088

BioProject SRA Nucleotide

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