Microbe sample from Pseudomonadota bacterium - BioSample - NCBI

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Microbe sample from Pseudomonadota bacterium

Identifiers: BioSample: SAMN09639113; Sample name: Uncultivated Proteobacteria bacterium SpSt-1196 genome recovered from SRR5216255; SRA: SRS3740639

Organism: Pseudomonadota bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; unclassified Pseudomonadota

Package: Microbe; version 1.0

Attributes

isolate	SpSt-1196
isolation source	hot spring sediment
collection date	2014-09-02
geographic location	USA: California
sample type	metagenomic assembly
latitude and longitude	39.0314 N 122.4323 W
subsource note	Metagenome-assembled genome binned from sequencing reads available in SRR5216255
metagenome source	sediment metagenome
assembly_method_and_version	DOE-JGI IMG deposited assembly (IMG Genome ID: 3300010291)
completeness_estimated	96.45
contamination_estimated	0.65
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	45.14
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA480137 metagenomes
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-07-11

Accession:: SAMN09639113
ID:: 9639113

BioProject SRA Nucleotide

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