Microbe sample from Caldithrix sp. - BioSample - NCBI

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Microbe sample from Caldithrix sp.

Identifiers: BioSample: SAMN09639165; Sample name: Uncultivated Caldithrix sp. SpSt-1242 genome recovered from SRR5214155; SRA: SRS3740308

Organism: Caldithrix sp.
cellular organisms; Bacteria; Pseudomonadati; Calditrichota; Calditrichia; Calditrichales; Calditrichaceae; Caldithrix; unclassified Caldithrix

Package: Microbe; version 1.0

Attributes

isolate	SpSt-1242
isolation source	hot spring sediment
collection date	2013-12-03
geographic location	USA: Zodletone Spring, Oklahoma
sample type	metagenomic assembly
latitude and longitude	34.9956 N 98.6889 W
subsource note	Metagenome-assembled genome binned from sequencing reads available in SRR5214155
metagenome source	hot springs metagenome
assembly_method_and_version	DOE-JGI IMG deposited assembly (IMG Genome ID: 3300010317)
completeness_estimated	38.9
contamination_estimated	1.1
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	23.62
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA480137 metagenomes
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-07-11

Accession:: SAMN09639165
ID:: 9639165

BioProject SRA Nucleotide

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