Microbe sample from Fidelibacterota bacterium - BioSample - NCBI

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Microbe sample from Fidelibacterota bacterium

Identifiers: BioSample: SAMN09926425; Sample name: Uncultivated Candidatus Marinimicrobia bacterium SZUA-1301 genome recovered from SRR1217460 SRR1217463 SRR1217565; SRA: SRS3745357

Organism: Fidelibacterota bacterium
cellular organisms; Bacteria; Pseudomonadati; FCB group; Fidelibacterota; unclassified Fidelibacterota

Package: Microbe; version 1.0

Attributes

isolate	SZUA-1301
isolation source	Abe hydrothermal plume 200m
collection date	2009-05-25
geographic location	Pacific Ocean:Lau Basin
sample type	metagenomic assembly
latitude and longitude	20.76121471 S 176.19057363 W
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR1217460 SRR1217463 SRR1217565
metagenome source	hydrothermal vent metagenome
assembly_method_and_version	MEGAHIT v1.1.2
completeness_estimated	57.17
contamination_estimated	9.34
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	15.63
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-08-28

Accession:: SAMN09926425
ID:: 9926425

BioProject SRA Nucleotide

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