Uropathogenic Escherichia coli clinical isolate BR... - BioSample - NCBI

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Uropathogenic Escherichia coli clinical isolate BR14-DEC

Identifiers: BioSample: SAMN10748593; Sample name: MS8881; SRA: SRS4256664

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: Pathogen: clinical or host-associated; version 1.0

Attributes

strain	BR14-DEC
collected by	Hospital das Clinincas Botucatu
collection date	2015
geographic location	Brazil: Botucatu, Sao Paulo State
host	Homo sapiens
host disease	Urinary tract infection
isolation source	urine
latitude and longitude	22.5309 S 48.2642 W
serotype	ST1193

BioProject: PRJNA511007 Escherichia coli strain:BR02-DEC
Retrieve all samples from this project

Submission: Sao Paulo State University, Patrick da Silva; 2019-01-15

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
cefepime	susceptible	==	29	mm	disk diffusion				CLSI
ampicillin	susceptible	==	25	mm	disk diffusion				CLSI
nitrofurantoin	susceptible	==	24	mm	disk diffusion				CLSI
trimethoprim-sulfamethoxazole	susceptible	==	29	mm	disk diffusion				CLSI
nalidixic acid	resistant	==	6	mm	disk diffusion				CLSI
gentamicin	susceptible	==	17	mm	disk diffusion				CLSI
amikacin	susceptible	==	21	mm	disk diffusion				CLSI
ciprofloxacin	resistant	==	6	mm	disk diffusion				CLSI
chloramphenicol	susceptible	==	18	mm	disk diffusion				CLSI
tetracycline	susceptible	==	15	mm	disk diffusion				CLSI
fosfomycin	susceptible	==	34	mm	disk diffusion				CLSI

Accession:: SAMN10748593
ID:: 10748593

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