Pathogen: environmental/food/other sample from Sal... - BioSample

Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Anatum

Organism: Salmonella enterica subsp. enterica serovar Anatum
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica

Attributes

isolation source	"pool of liver, heart and bone marrow"
Interagency Food Safety Analytics Collaboration (IFSAC) category	veterinary clinical/research\| companion animal
source type	animal
collection date	2018-12-11
strain	SAL-18-VL-NY-MS-0014
isolate name alias	CFSAN094000
collected by	Mississippi State University Veterinary Research and Diagnostic Laboratory
latitude and longitude	missing
geographic location	USA:MS
description	Pool of organs (liver, heart, and bone marrow)
serovar	Anatum
sub species	enterica
host	Canis lupus familiaris
project name	Vet-LIRN
sequenced by	WGS-NY
attribute_package	environmental/food/other
ontological term	bone element:UBERON_0001474, bone marrow:UBERON_0002371, canis:NCBITAXON_9611, heart:UBERON_0000948, liver:UBERON_0002107, pool water:GENEPIO_0001014
PublicAccession	CFSAN094000
ProjectAccession	PRJNA324570
Species	enterica
Genus	Salmonella

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
enrofloxacin	not defined	<=	0.12	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
neomycin	not defined	<=	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
streptomycin	not defined	<=	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
gentamicin	not defined	<=	0.5	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
trimethoprim-sulfamethoxazole	not defined	<=	0.5/9.5	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
amoxicillin	not defined	==	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ceftiofur	not defined	==	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
florfenicol	not defined	==	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
oxytetracycline	not defined	==	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
spectinomycin	not defined	==	32	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
sulfadimethoxine	not defined	==	256	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
tetracycline	not defined	==	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
clindamycin	not defined	>	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
erythromycin	not defined	>	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
novobiocin	not defined	>	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
penicillin	not defined	>	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
tylosin	not defined	>	20	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI