Pathogen: environmental/food/other sample from Sta... - BioSample

Pathogen: environmental/food/other sample from Staphylococcus pseudintermedius

Identifiers: BioSample: SAMN11640632; SRA: SRS4756428; CFSAN: CFSAN093561

Organism: Staphylococcus pseudintermedius
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus intermedius group

Package: Pathogen: environmental/food/other; version 1.0

Attributes

strain	SPSE-18-VL-OH-GA-0028
collected by	University of Georgia College of Veterinary Medicine Athens Veterinary Diagnostic Laboratory
collection date	2018-07-10
geographic location	USA: GA
isolate name alias	CFSAN093561
latitude and longitude	Not Provided
isolation source	incision site
Interagency Food Safety Analytics Collaboration (IFSAC) category	veterinary clinical/research\| companion animal
source type	animal
host	Canis lupus familiaris
project name	Vet-LIRN
sequenced by	Ohio Department of Agriculture\|Animal Disease Diagnostic Laboratory
PublicAccession	CFSAN093561
ProjectAccession	PRJNA318593
Species	pseudintermedius
Genus	Staphylococcus
ontological term	canis:NCBITAXON_9611\| incision site:CURATION_0000472
attribute_package	environmental/food/other

Links

BioProject: PRJNA318593 Staphylococcus
Retrieve all samples from this project

Submission: CFSAN; 2019-05-14

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
imipenem	not defined	<=	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
nitrofurantoin	not defined	<=	16	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
rifampin	not defined	<=	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
trimethoprim-sulfamethoxazole	not defined	<=	2/38	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
vancomycin	not defined	<=	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
amikacin	not defined	<=	16	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ampicillin	not defined	>	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefazolin	not defined	>	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefovecin	not defined	>	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefpodoxime	not defined	>	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
clindamycin	not defined	>	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
enrofloxacin	not defined	>	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
erythromycin	not defined	>	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
marbofloxacin	not defined	>	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
penicillin	not defined	>	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
amoxicillin-clavulanic acid	not defined	==	4/2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cephalothin	not defined	==	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
chloramphenicol	not defined	==	32	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
gentamicin	not defined	==	16	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
oxacillin	not defined	>	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
doxycycline	not defined	>	0.5	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
minocycline	not defined	>	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
pradofloxacin	not defined	>	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
tetracycline	not defined	>	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI

Accession:: SAMN11640632
ID:: 11640632

BioProject SRA Nucleotide

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Pathogen: environmental/food/other sample from Staphylococcus pseudintermedius

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