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Pathogen: clinical or host-associated sample from Shigella sonnei

Identifiers
BioSample: SAMN11948150; SRA: SRS4870972; CFSAN: CFSAN091702
Organism
Shigella sonnei
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
Package
Pathogen: clinical or host-associated; version 1.0
Attributes
isolation sourcestool
Interagency Food Safety Analytics Collaboration (IFSAC) categoryclinical/research| human
source typehuman
collection date2018-10
strainCFSAN091702
isolate name alias0000-0078-7578
collected byClinical Micorbiology Laboratory @ Brigham and Women's Hospital
latitude and longitudemissing
geographic locationUSA:MA
host diseasediarrhea
hostHomo sapiens
project nameGenomeTrakr
sequenced byFDA Center for Food Safety and Applied Nutrition
attribute_packageclinical/host-associated
ontological termfeces:UBERON_0001988
PublicAccessionCFSAN091702
ProjectAccessionPRJNA278886
Speciessonnei
GenusShigella
BioProject
PRJNA278886
Retrieve all samples from this project

Submission
CFSAN; 2019-06-03
Accession:
SAMN11948150
ID:
11948150

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