Pathogen: environmental/food/other sample from Esc... - BioSample - NCBI

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Pathogen: environmental/food/other sample from Escherichia coli

Identifiers: BioSample: SAMN12056373; SRA: SRS4972171; CFSAN: CFSAN094621

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: Pathogen: environmental/food/other; version 1.0

Attributes

strain	ECOL-18-VL-LA-PA-Ryan-0036
collected by	PA-Ryan
collection date	2018-09-07
geographic location	USA:PA
isolate name alias	CFSAN094621
latitude and longitude	missing
isolation source	tracheal wash (Canis lupus familiaris)
Interagency Food Safety Analytics Collaboration (IFSAC) category	veterinary clinical/research\| companion animal
source type	animal
PublicAccession	CFSAN094621
ProjectAccession	PRJNA325243
Species	coli
Genus	Escherichia
ontological term	canis lupus familiaris:NCBITAXON_9615\| trach wash:CURATION_0001489
attribute_package	environmental/food/other

Links

BioProject: PRJNA325243 Veterinary Pathogens - from archived samples
Retrieve all samples from this project

Submission: CFSAN; 2019-06-13

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
polymyxin B	not defined	<=	0.25	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
amikacin	not defined	<=	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
nitrofurantoin	not defined	==	64	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
tobramycin	not defined	==	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
amoxicillin-clavulanic acid	not defined	>	32/16	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ampicillin	not defined	>	32	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cephalexin	not defined	>	64	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefovecin	not defined	>	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefpodoxime	not defined	>	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ceftiofur	not defined	>	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
chloramphenicol	not defined	>	64	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
enrofloxacin	not defined	>	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
marbofloxacin	not defined	>	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
piperacillin	not defined	>	128	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
tetracycline	not defined	>	16	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
gentamicin	not defined	==	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
imipenem	not defined	==	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI

Accession:: SAMN12056373
ID:: 12056373

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