Pathogen: environmental/food/other sample from Sal... - BioSample - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Infantis

Identifiers: BioSample: SAMN12784460; SRA: SRS5406574; CFSAN: CFSAN098737

Organism: Salmonella enterica subsp. enterica serovar Infantis
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica

Package: Pathogen: environmental/food/other; version 1.0

Attributes

Interagency Food Safety Analytics Collaboration (IFSAC) category	chicken
source type	food
collected by	South Dakota ADRDL
collection date	2019-07
geographic location	USA:SD
isolate name alias	CFSAN098737
latitude and longitude	missing
strain	19SD07CB30-S1
project name	GenomeTrakr
sequenced by	South Dakota State University \| South Dakota Animal Disease Research and Diagnostic Laboratory
isolation source	chicken breast
serovar	Infantis
sub species	enterica
project name	NARMS
attribute_package	environmental/food/other
ontological term	chicken breast:FOODON_00002703
PublicAccession	CFSAN098737
Species	enterica
Genus	Salmonella

BioProject: PRJNA292661 Salmonella enterica
Retrieve all samples from this project

Submission: CFSAN; 2019-09-18

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amoxicillin-clavulanic acid	susceptible	==	4/2	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ampicillin	resistant	>	32	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
azithromycin	susceptible	==	2	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
cefoxitin	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ceftriaxone	resistant	==	64	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
chloramphenicol	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ciprofloxacin	resistant	==	0.25	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
gentamicin	susceptible	<=	0.25	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
meropenem	susceptible	<=	0.06	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
nalidixic acid	resistant	>	32	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
streptomycin	resistant	==	32	mg/L	MIC	Sensititre	Trek	GM-NEG	NARMS
sulfisoxazole	resistant	>	256	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
tetracycline	resistant	>	32	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
trimethoprim-sulfamethoxazole	susceptible	<=	0.12/2.38	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI

Accession:: SAMN12784460
ID:: 12784460

BioProject SRA Nucleotide

Supplemental Content

Related information

BioProject
BioProject links
SRA
Links to SRA experiments
Nucleotide
Nucleotide links
Assembly
Assembly
Taxonomy
Links to Taxonomy

Recent activity

Clear Turn Off Turn On

Pathogen: environmental/food/other sample from Salmonella enterica subsp. enteri...
Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Infantis

biosample

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > DNA & RNA > BioSample