Pathogen: environmental/food/other sample from Sta... - BioSample

Pathogen: environmental/food/other sample from Staphylococcus pseudintermedius

Identifiers: BioSample: SAMN12799300; SRA: SRS5416405; CFSAN: CFSAN098848

Organism: Staphylococcus pseudintermedius
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus intermedius group

Package: Pathogen: environmental/food/other; version 1.0

Attributes

isolation source	tracheal wash
Interagency Food Safety Analytics Collaboration (IFSAC) category	veterinary clinical/research\| companion animal
source type	animal
collection date	2019-04-03
strain	SPSE-19-VL-NY-NJ-0002
isolate name alias	CFSAN098848
collected by	New Jersey Animal Health Diagnostic Laboratory
latitude and longitude	missing
geographic location	USA:NJ
host	Canis lupus familiaris
host disease	Pyoderma
project name	Vet-LIRN
sequenced by	WGS-NY
attribute_package	environmental/food/other
ontological term	canis:NCBITAXON_9611\| tracheal wash:CURATION_0001486
PublicAccession	CFSAN098848
ProjectAccession	PRJNA324567
Species	pseudintermedius
Genus	Staphylococcus

BioProject: PRJNA324567 Staphylococcus
Retrieve all samples from this project

Submission: CFSAN; 2019-09-20

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amoxicillin-clavulanic acid	not defined	==	0.25/12	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ampicillin	not defined	==	0.25	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefovecin	not defined	==	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefpodoxime	not defined	==	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ceftiofur	not defined	==	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
gentamicin	not defined	==	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
oxacillin	not defined	==	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
amikacin	not defined	<=	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefazolin	not defined	<=	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefoxitin	not defined	<=	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cephalothin	not defined	<=	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
imipenem	not defined	<=	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
penicillin	not defined	<=	0.06	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
rifampin	not defined	<=	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ticarcillin	not defined	<=	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
chloramphenicol	not defined	>	16	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
clindamycin	not defined	>	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
enrofloxacin	not defined	>	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
erythromycin	not defined	>	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
marbofloxacin	not defined	>	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
trimethoprim-sulfamethoxazole	not defined	>	2/38	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI

Accession:: SAMN12799300
ID:: 12799300

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Pathogen: environmental/food/other sample from Staphylococcus pseudintermedius

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