Pathogen: environmental/food/other sample from Sal... - BioSample

Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Enteritidis

Organism: Salmonella enterica subsp. enterica serovar Enteritidis
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica

Attributes

isolation source	Colon
Interagency Food Safety Analytics Collaboration (IFSAC) category	veterinary clinical/research\| companion animal
source type	animal
strain	SAL-19-VL-WA-KY-0004
collection date	2019-04-01
geographic location	USA:IN
isolate name alias	CFSAN099945
collected by	University of Kentucky Veterinary Diagnostic Laboratory
latitude and longitude	missing
sub species	enterica
serovar	Enteritidis
host	Canis lupus familiaris
project name	Vet-LIRN-SAL-WA
sequenced by	Washington State University Washington Animal Disease Diagnostic Laboratory
PublicAccession	CFSAN099945
attribute_package	environmental/food/other
Genus	Salmonella
Species	enterica
ProjectAccession	PRJNA481328
ontological term	canis lupus familiaris:NCBITAXON_9615, colon:UBERON_0001155

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amikacin	not defined	<=	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefpodoxime	not defined	<=	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ceftazidime	not defined	<=	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
enrofloxacin	not defined	<=	0.12	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
imipenem	not defined	<=	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
marbofloxacin	not defined	<=	0.12	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
orbifloxacin	not defined	<=	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
piperacillin-tazobactam	not defined	<=	8/4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
pradofloxacin	not defined	<=	0.25	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
tetracycline	not defined	<=	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
trimethoprim-sulfamethoxazole	not defined	<=	0.5/9.5	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
amoxicillin-clavulanic acid	not defined	==	1/0.5	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ampicillin	not defined	==	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cephalexin	not defined	==	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefazolin	not defined	==	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefovecin	not defined	==	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
chloramphenicol	not defined	==	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
doxycycline	not defined	==	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
gentamicin	not defined	==	0.5	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI