Pathogen: environmental/food/other sample from Sal... - BioSample - NCBI

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Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Infantis

Identifiers: BioSample: SAMN13703483; SRA: SRS5926536; CFSAN: CFSAN101974

Organism: Salmonella enterica subsp. enterica serovar Infantis
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica

Package: Pathogen: environmental/food/other; version 1.0

Attributes

Interagency Food Safety Analytics Collaboration (IFSAC) category	chicken
source type	food
collected by	South Dakota ADRDL
collection date	2019-11
geographic location	USA:SD
isolate name alias	CFSAN101974
latitude and longitude	missing
strain	19SD11CB02-S1
project name	GenomeTrakr
sequenced by	South Dakota State University \| South Dakota Animal Disease Research and Diagnostic Laboratory
isolation source	chicken breast
serovar	Infantis
sub species	enterica
project name	NARMS
attribute_package	environmental/food/other
ontological term	chicken breast:FOODON_00002703
PublicAccession	CFSAN101974
Species	enterica
Genus	Salmonella

BioProject: PRJNA292661 Salmonella enterica
Retrieve all samples from this project

Submission: CFSAN; 2019-12-31

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amoxicillin-clavulanic acid	susceptible	<=	1/0.5	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ampicillin	susceptible	<=	1	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
azithromycin	susceptible	==	2	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
cefoxitin	susceptible	==	1	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ceftriaxone	susceptible	<=	0.25	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
chloramphenicol	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ciprofloxacin	nonsusceptible	==	0.12	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
gentamicin	susceptible	<=	0.25	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
meropenem	susceptible	<=	0.06	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
nalidixic acid	resistant	>	32	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
streptomycin	susceptible	==	16	mg/L	MIC	Sensititre	Trek	GM-NEG	NARMS
sulfisoxazole	resistant	>	256	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
tetracycline	resistant	>	32	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
trimethoprim-sulfamethoxazole	susceptible	<=	0.12/2.38	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI

Accession:: SAMN13703483
ID:: 13703483

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