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Pathogen: environmental/food/other sample from Escherichia coli

Identifiers: BioSample: SAMN15349900; Sample name: ECOL-20-VL-LA-KY-0006; SRA: SRS6892879

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: Pathogen: environmental/food/other; version 1.0

Attributes

strain	ECOL-20-VL-LA-KY-0006
collected by	Murray State University Breathitt Veterinary Center
collection date	2020-02-05
geographic location	USA:KY
isolation source	urine
latitude and longitude	Not collected
serotype	O24:H18
host	Canis lupus familiaris
intended consumer	not applicable
project name	Vet-LIRN
purpose of sampling	Monitoring
sequenced by	Louisiana Animal Disease Diagnostic Laboratory - Louisiana State University
source type	animal

BioProject: PRJNA324573 Escherichia coli
Retrieve all samples from this project

Submission: Louisiana State University, Laura Peak; 2020-06-23

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
cefpodoxime	not defined	<=	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ceftazidime	not defined	<=	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
enrofloxacin	not defined	<=	0.12	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
imipenem	not defined	<=	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
marbofloxacin	not defined	<=	0.12	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
orbifloxacin	not defined	<=	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
piperacillin-tazobactam	not defined	<=	8/4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
pradofloxacin	not defined	<=	0.25	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
trimethoprim-sulfamethoxazole	not defined	<=	0.5/9.5	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
amoxicillin-clavulanic acid	not defined	==	8/4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cephalexin	not defined	==	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefazolin	not defined	==	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefovecin	not defined	==	0.5	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
chloramphenicol	not defined	==	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
gentamicin	not defined	==	0.5	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ampicillin	not defined	>	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
doxycycline	not defined	>	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
tetracycline	not defined	>	16	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
amikacin	not defined	<=	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI

Accession:: SAMN15349900
ID:: 15349900

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