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Pathogen: environmental/food/other sample from Escherichia coli

Identifiers
BioSample: SAMN15717387; SRA: SRS7136909; CFSAN: CFSAN106441
Organism
Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Package
Pathogen: environmental/food/other; version 1.0
Attributes
strainECOL-20-VL-WA-IL-0007
collected byUniversity of Illinois College of Veterinary Medicine, Veterinary Diagnostic Laboratory
collection date2020-02-06
geographic locationUSA:IL
isolate name aliasCFSAN106441
latitude and longitudemissing
isolation sourceIncision
Interagency Food Safety Analytics Collaboration (IFSAC) categoryveterinary clinical/research| companion animal
source typeanimal
hostCanis lupus familiaris
project nameVet-LIRN-E.coli-WA
sequenced byWashington State University Washington Animal Disease Diagnostic Laboratory
PublicAccessionCFSAN106441
ProjectAccessionPRJNA481346
Speciescoli
GenusEscherichia
ontological termcanis lupus familiaris:NCBITAXON_9615| incision:CURATION_0000473
attribute_packageenvironmental/food/other
Links

BioProject
PRJNA481346 Escherichia coli
Retrieve all samples from this project

Submission
CFSAN; 2020-08-03
Antibiogram
AntibioticResistance phenotypeMeasurement signMeasurementMeasurement unitsLaboratory typing methodLaboratory typing platformVendorLaboratory typing method version or reagentTesting standard
enrofloxacinnot defined<=0.12mg/LMICSensititreTrek96-Well PlateCLSI
imipenemnot defined<=1mg/LMICSensititreTrek96-Well PlateCLSI
marbofloxacinnot defined<=0.12mg/LMICSensititreTrek96-Well PlateCLSI
orbifloxacinnot defined<=1mg/LMICSensititreTrek96-Well PlateCLSI
piperacillin-tazobactamnot defined<=8/4mg/LMICSensititreTrek96-Well PlateCLSI
pradofloxacinnot defined<=0.25mg/LMICSensititreTrek96-Well PlateCLSI
tetracyclinenot defined<=4mg/LMICSensititreTrek96-Well PlateCLSI
trimethoprim-sulfamethoxazolenot defined<=0.5/9.5mg/LMICSensititreTrek96-Well PlateCLSI
cephalexinnot defined>16mg/LMICSensititreTrek96-Well PlateCLSI
cefazolinnot defined>32mg/LMICSensititreTrek96-Well PlateCLSI
cefovecinnot defined>8mg/LMICSensititreTrek96-Well PlateCLSI
cefpodoximenot defined>8mg/LMICSensititreTrek96-Well PlateCLSI
gentamicinnot defined>8mg/LMICSensititreTrek96-Well PlateCLSI
amoxicillin-clavulanic acidnot defined>8/4mg/LMICSensititreTrek96-Well PlateCLSI
ampicillinnot defined>8mg/LMICSensititreTrek96-Well PlateCLSI
ceftazidimenot defined==16mg/LMICSensititreTrek96-Well PlateCLSI
chloramphenicolnot defined==8mg/LMICSensititreTrek96-Well PlateCLSI
doxycyclinenot defined==2mg/LMICSensititreTrek96-Well PlateCLSI
amikacinnot defined<=4mg/LMICSensititreTrek96-Well PlateCLSI
Accession:
SAMN15717387
ID:
15717387

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