Pathogen: environmental/food/other sample from Sal... - BioSample

Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Anatum

Organism: Salmonella enterica subsp. enterica serovar Anatum
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica

Attributes

isolation source	intestine
Interagency Food Safety Analytics Collaboration (IFSAC) category	veterinary clinical/research\| cow
source type	animal
strain	SAL-20-VL-WA-IL-0001
collection date	2020-02-28
geographic location	USA:IL
isolate name alias	CFSAN106438
collected by	University of Illinois College of Veterinary Medicine, Veterinary Diagnostic Laboratory
latitude and longitude	missing
host	Bos taurus
project name	Vet-LIRN-SAL-WA
sequenced by	Washington State University Washington Animal Disease Diagnostic Laboratory
serovar	Anatum
sub species	enterica
PublicAccession	CFSAN106438
attribute_package	environmental/food/other
Genus	Salmonella
Species	enterica
ProjectAccession	PRJNA481328
ontological term	bos taurus:NCBITAXON_9913, intestine:UBERON_0000160

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
danofloxacin	not defined	<=	0.12	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
enrofloxacin	not defined	<=	0.12	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
gentamicin	not defined	<=	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
neomycin	not defined	<=	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
trimethoprim-sulfamethoxazole	not defined	<=	2/38	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ampicillin	not defined	==	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ceftiofur	not defined	==	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
chlortetracycline	not defined	==	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
florfenicol	not defined	==	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
oxytetracycline	not defined	==	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
spectinomycin	not defined	==	32	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
tulathromycin	not defined	==	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
clindamycin	not defined	>	16	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
penicillin	not defined	>	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
sulfadimethoxine	not defined	>	256	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
tiamulin	not defined	>	32	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
tilmicosin	not defined	>	64	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
tylosin	not defined	>	32	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI