Pathogen: environmental/food/other sample from Esc... - BioSample - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Pathogen: environmental/food/other sample from Escherichia coli

Identifiers: BioSample: SAMN15729771; Sample name: ECOL-20-VL-LA-PA-Ryan-0010; SRA: SRS7145937

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: Pathogen: environmental/food/other; version 1.0

Attributes

strain	ECOL-20-VL-LA-PA-Ryan-0010
collected by	University of Pennsylvania School of Veterinary Medicine Ryan Veterinary Hospital
collection date	2020-03-01
geographic location	USA:PA
isolation source	trachea
latitude and longitude	Not collected
serotype	O2:H7
host	Canis lupus familiaris
intended consumer	not applicable
project name	Vet-LIRN
purpose of sampling	Monitoring
sequenced by	Louisiana Animal Disease Diagnostic Laboratory - Louisiana State University
source type	animal

BioProject: PRJNA324573 Escherichia coli
Retrieve all samples from this project

Submission: Louisiana State University, Laura Peak; 2020-08-04

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amikacin	not defined	<=	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefovecin	not defined	<=	0.5	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefpodoxime	not defined	<=	0.25	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ceftazidime	not defined	<=	0.12	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ceftiofur	not defined	<=	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
gentamicin	not defined	<=	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
imipenem	not defined	<=	0.25	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
marbofloxacin	not defined	<=	0.5	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
nitrofurantoin	not defined	<=	16	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cephalexin	not defined	==	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
chloramphenicol	not defined	==	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ciprofloxacin	not defined	==	0.5	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
doxycycline	not defined	==	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
enrofloxacin	not defined	==	0.5	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
polymyxin B	not defined	==	0.5	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI

Accession:: SAMN15729771
ID:: 15729771

BioProject SRA Nucleotide

Supplemental Content

Related information

BioProject
BioProject links
SRA
Links to SRA experiments
Nucleotide
Nucleotide links
Assembly
Assembly
Taxonomy
Links to Taxonomy

Recent activity

Clear Turn Off Turn On

Pathogen: environmental/food/other sample from Escherichia coli
Pathogen: environmental/food/other sample from Escherichia coli

biosample

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > DNA & RNA > BioSample