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Pathogen: environmental/food/other sample from Escherichia coli

Identifiers: BioSample: SAMN19101989; Sample name: ECOL-20-VL-WA-NY-0042; SRA: SRS8923415

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: Pathogen: environmental/food/other; version 1.0

Attributes

strain	ECOL-20-VL-WA-NY-0042
collected by	Cornell University, College of Veterinary Medicine
collection date	2020-11-01
geographic location	USA:NY
isolation source	urine
latitude and longitude	Missing
host	Canis lupus familiaris
project name	Vet-LIRN-E.coli-WA
sequenced by	Washington State University Washington Animal Disease Diagnostic Laboratory
source type	animal
WADDL Description	ECOL-20-VL-WA-NY-0042

BioProject: PRJNA481346 Escherichia coli
Retrieve all samples from this project

Submission: Vet-LIRN-WA; 2021-05-10

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
tetracycline	not defined	<=	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
trimethoprim-sulfamethoxazole	not defined	<=	2/38	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cephalexin	not defined	>	256	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ceftiofur	not defined	>	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
amoxicillin-clavulanic acid	not defined	==	64/32	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ampicillin	not defined	==	256	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI

Accession:: SAMN19101989
ID:: 19101989

BioProject SRA Nucleotide

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