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Pathogen: environmental/food/other sample from Escherichia coli

Identifiers: BioSample: SAMN29770912; Sample name: ECOL-21-VL-WA-NY-0039; SRA: SRS13919407

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: Pathogen: environmental/food/other; version 1.0

Attributes

strain	ECOL-21-VL-WA-NY-0039
collected by	Cornell University, College of Veterinary Medicine
sequenced by	Washington State University Washington Animal Disease Diagnostic Laboratory
collection date	2021-10-01
geographic location	USA:NY
isolation source	urine
source type	animal
latitude and longitude	Not Collected
host	Canis lupus familiaris
project name	Vet-LIRN-E.coli-WA

BioProject: PRJNA481346 Escherichia coli
Retrieve all samples from this project

Submission: Vet-LIRN-WA; 2022-07-15

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
enrofloxacin	not defined	<=	0.03	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ceftiofur	not defined	<=	0.5	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
tetracycline	not defined	<=	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
trimethoprim-sulfamethoxazole	not defined	<=	2/38	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
amoxicillin-clavulanic acid	not defined	==	4/2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ampicillin	not defined	==	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cephalexin	not defined	==	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI

Accession:: SAMN29770912
ID:: 29770912

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