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Animal sample from Dendropsophus ebraccatus (hourglass treefrog) for VGP genome aDenEbr1

Identifiers
BioSample: SAMN32145295; Sample name: Animal sample from Dendropsophus ebraccatus (hourglass treefrog) for VGP reference genome aDenEbr1; SRA: SRS18387290
Organism
Dendropsophus ebraccatus (hourglass treefrog)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Hylidae; Hylinae; Dendropsophini; Dendropsophus
Package
Model organism or animal; version 1.0
Attributes
isolateaDenEbr1
development stageadult
sexfemale
tissuewhole body, brain, muscle, liver
biomaterial providerJustin Touchon, Vassar College
birth dateOctober 26, 2016
birth locationVasar College
collected byJustin Touchon, Erich Jarvis
collection date2018-03-28
death dateMarch 28, 2018
geographic locationUSA: Vassar College, Poughkeepsie, New York
latitude and longitude41.684639 N 73.895553 W
storage conditions-80oC
treatmentflash frozen
Smithsonian Tropical Research InstituteIACUC #2016-0601-2019-A2
Vassar CollegeIACUC #14-22B
Panamanian Ministry for the Environment Scientific Collection permit#SE/A-66-26
Description

The hourglass treefrog (Dendropsophus ebraccatus) name refers to its hourglass shape. The hourglass treefrog is found throughout Central America. It has plasticity in reproduction, laying eggs in water under some conditions and laying eggs on land under others. This female is from a trio of samples, with the parents (mother aDenEbr4 and father aDenEbr5) collected in Gamboa, Panama, and the child (aDenEbr1) breed in captivity at Vassar College in Poughkeepsie, New York, done and coordinated by Justin Touchon, to create a high-quality reference genome for both maternal and paternal haplotypes of aDenEbr1. Genome sequencing and assembly was coordinated by Erich D. Jarvis and Olivier Fedrigo at the Rockefeller University Vertebrate Genome Lab, and as part of the Vertebrate Genomes Project (VGP).

BioProjects
PRJNA1145943
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PRJNA910819 Dendropsophus ebraccatus isolate:aDenEbr1
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PRJNA910818 Dendropsophus ebraccatus isolate:aDenEbr1
Retrieve all samples from this project

Submission
G10K, Erich Jarvis; 2022-12-10
Accession:
SAMN32145295
ID:
32145295

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