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Microbe sample from Escherichia coli

Identifiers
BioSample: SAMN37517886; Sample name: LACPHL-BACT-2023-00106; SRA: SRS18959141
Organism
Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Package
Microbe; version 1.0
Attributes
strainLACPHL-BACT-2023-00106
hostHomo sapiens
isolation sourceurine
collection date2023-08-14
geographic locationUSA: California, Los Angeles County
sample typewhole organism
mlstST617
pubmlst_schemeecoli_achtman_4
amrfinderplus_amr_genesgyrA_D87N,gyrA_S83L,glpT_E448K,parC_S80I,parE_S458A,mph(E),msr(E),sul1,blaDHA,ble,blaNDM-1,cmlA6,aadA1,ant(2'')-Ia,erm(B),tet(B),mph(A),arr-3,catB3,blaOXA-1,aac(6')-Ib-cr5,blaTEM
amrfinderplus_amr_subclassesAMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN,BETA-LACTAM,BLEOMYCIN,CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL,EFFLUX,FOSFOMYCIN,GENTAMICIN/KANAMYCIN/TOBRAMYCIN,MACROLIDE,QUINOLONE,RIFAMYCIN,STREPTOMYCIN,SULFONAMIDE,TETRACYCLINE
amrfinderplus_db_version2023-04-17.1
BioProject
PRJNA1004324
Retrieve all samples from this project

Submission
LACPHL; 2023-09-22
Accession:
SAMN37517886
ID:
37517886

BioProject SRA Nucleotide

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