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Microbe sample from Escherichia coli

Identifiers
BioSample: SAMN38146129; Sample name: LACPHL-BACT-2023-00155; SRA: SRS19438223
Organism
Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Package
Microbe; version 1.0
Attributes
strainLACPHL-BACT-2023-00155
hostHomo sapiens
isolation sourceurine
collection date2023-09-12
geographic locationUSA: California, Los Angeles County
sample typewhole organism
MLSTST131
PubMLST schemeecoli_achtman_4
AMRFinderPlus AMR core genespmrB_E123D,glpT_E448K,gyrA_D87N,gyrA_S83L,ptsI_V25I,parE_I529L,parC_E84V,parC_S80I,uhpT_E350Q,blaCMY-6,dfrA1,sat2,ble,blaNDM-1,rmtC,erm(42),sul1,mph(A),aph(6)-Id,tet(A),blaCTX-M-27,aadA5,dfrA17,aph(3'')-Ib,aac(6')-Ib3,sul2
AMRFinderPlus AMR subclassesAMIKACIN/KANAMYCIN/TOBRAMYCIN,AMINOGLYCOSIDE,BETA-LACTAM,BLEOMYCIN,CARBAPENEM,CEPHALOSPORIN,COLISTIN,EFFLUX,FOSFOMYCIN,MACROLIDE,QUINOLONE,STREPTOMYCIN,STREPTOTHRICIN,SULFONAMIDE,TETRACYCLINE,TRIMETHOPRIM
AMRFinderPlus DB version2023-04-17.1
BioProject
PRJNA1004324
Retrieve all samples from this project

Submission
LACPHL; 2023-11-07
Accession:
SAMN38146129
ID:
38146129

BioProject SRA Nucleotide

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