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MIMAG Metagenome-assembled Genome sample from Treponemataceae bacterium

Identifiers
BioSample: SAMN39889721; Sample name: SO_2016_GW1_15
Organism
Treponemataceae bacterium
cellular organisms; Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia; Spirochaetales; Treponemataceae; unclassified Treponemataceae
Package
MIMAG: metagenome-assembled genome; version 6.0
Attributes
isolateSO_2016_GW1_15
collection date2016-07
broad-scale environmental contextlandfill [ENVO:00000533]
local-scale environmental contextlandfill [ENVO:00000533]
environmental mediumleachate [ENVO:00002141]
geographic locationCanada: Waterloo
isolation sourcewater from a groundwater well adjacent to an active municipal landfill in Southern Ontario
latitude and longitude43.44 N 80.58 W
relationship to oxygenanaerobe
sample collection device or method144 mm 0.1 micron PES filter
sample material processingDNA extraction with MoBio Powersoil kit, Illumina HiSeq sequencing PE 150 bp
size fraction selected0.1 micron
derived fromThis BioSample is a metagenomic assembly obtained from the OW334 groundwater well metagenome BioSample: SAMN07630779
sample typemetagenomic assembly
metagenome sourcelandfill metagenome
metagenomic1
environmental-sample1
Description

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA823399 landfill metagenome
Retrieve all samples from this project

Submission
University of Waterloo, Laura Hug; 2024-02-08
Accession:
SAMN39889721
ID:
39889721

BioProject Nucleotide

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