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MIMAG Metagenome-assembled Genome sample from Patescibacteria group bacterium

Identifiers
BioSample: SAMN39904692; Sample name: SO_2017_SWC_51
Organism
Patescibacteria group bacterium
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Patescibacteria group; unclassified Patescibacteria group
Package
MIMAG: metagenome-assembled genome; version 6.0
Attributes
isolateSO_2017_SWC_51
collection date2017-10
broad-scale environmental contextlandfill [ENVO:00000533]
local-scale environmental contextlandfill [ENVO:00000533]
environmental mediumleachate [ENVO:00002141]
geographic locationCanada: Waterloo
isolation sourceleachate from a stormwater catchment at an active municipal landfill in Southern Ontario
latitude and longitude43.44 N 80.58 W
relationship to oxygenanaerobe
sample collection device or method144 mm 0.1 micron PES filter
sample material processingDNA extraction with MoBio Powersoil kit, Illumina HiSeq sequencing PE 150 bp
size fraction selected0.1 micron
derived fromThis BioSample is a metagenomic assembly obtained from the Southern Ontario, Canada - Pumphouse #1 landfill metagenome BioSample: SAMN10350495
sample typemetagenomic assembly
metagenome sourcelandfill metagenome
metagenomic1
environmental-sample1
Description

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA823399 landfill metagenome
Retrieve all samples from this project

Submission
University of Waterloo, Laura Hug; 2024-02-09
Accession:
SAMN39904692
ID:
39904692

BioProject Nucleotide

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