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MIMAG Metagenome-assembled Genome sample from Dehalococcoidia bacterium

Identifiers
BioSample: SAMN39963264; Sample name: Lejia_B_Bacteria_68_106; SRA: SRS20513671
Organism
Dehalococcoidia bacterium
cellular organisms; Bacteria; Bacillati; Chloroflexota; Dehalococcoidia; unclassified Dehalococcoidia
Package
MIMAG: metagenome-assembled genome, sediment; version 6.0
Attributes
isolation sourceSediment layer of the Laguna Lejia terrace
collection date2018-11
geographic locationChile: Laguna Lejia, Altiplano, Andes
latitude and longitude23.5 S 67.7 W
pH8.089999999999998
derived fromSAMN39953876
isolateLejiaB_68_106
depth7-9 cm
elevation4,325 m.a.s.l.
broad-scale environmental contextlake sediment biome (ENVO:00000546)
local-scale environmental contextsaline sediment environment (ENVO:01001050)
environmental mediumsaline sediment environment (ENVO:01001050)
sample typemetagenomic assembly
metagenome sourcesediment metagenome
Chlorine (ppm)2448.02393179229
Sodium (ppm)4781.66277135578
Magnesium (ppm)1654.52067581549
Potassium (ppm)456.256332164944
Calcium (ppm)4703.33616029625
Sulfur from sulfate (ppm)9659.25501837019
Boron (ppm)91.9583476867198
Fluorine (ppm)15.1931534592442
Lithium (ppm)7.40532301481463
Nitrogen from nitrate (ppm)4.13350731378724
Bismuth (ppm)9.85915174843711
Bromine (ppm)0
Strontium (ppm)1.29402192440536
Arsenic (ppm)1.74443353738751
Vanadium (ppm)0.487764964594492
Rubidium (ppm)1.29402192440536
Molybdenum (ppm)0.110036754770853
Magnesium calcite (%)0
Albite (%)0
Andesine (%)67.2
Anorthite (%)0
Anorthoclase (%)0
Muscovite (%)2.2
Gypsum (%)28.5
Halite (%)0
Quartz (%)2.1
metagenomic1
environmental-sample1
Description

In depth column, depths start from the base of the lake terrace (0 cm) and ascend vertically (up to 95 cm)

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA1076829
Retrieve all samples from this project

Submission
Centro de Astrobiologia, Maria Angeles Lezcano Vega; 2024-02-16
Accession:
SAMN39963264
ID:
39963264

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