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MIMAG Metagenome-assembled Genome sample from Actinomycetota bacterium

Identifiers
BioSample: SAMN39963393; Sample name: Lejia_C_Bacteria_63_9; SRA: SRS20516935
Organism
Actinomycetota bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; unclassified Actinomycetota
Package
MIMAG: metagenome-assembled genome, sediment; version 6.0
Attributes
isolation sourceSediment layer of the Laguna Lejia terrace
collection date2018-11
geographic locationChile: Laguna Lejia, Altiplano, Andes
latitude and longitude23.5 S 67.7 W
pH8.296666666666667
derived fromSAMN39953877
isolateLejiaC_63_9
depth9-35 cm
elevation4,325 m.a.s.l.
broad-scale environmental contextlake sediment biome (ENVO:00000546)
local-scale environmental contextsaline sediment environment (ENVO:01001050)
environmental mediumsaline sediment environment (ENVO:01001050)
sample typemetagenomic assembly
metagenome sourcesediment metagenome
Chlorine (ppm)13456.1639033634
Sodium (ppm)18918.5911233851
Magnesium (ppm)7332.0247534677
Potassium (ppm)1276.72661107692
Calcium (ppm)592.977252925364
Sulfur from sulfate (ppm)13199.0188338019
Boron (ppm)217.16409057748
Fluorine (ppm)54.6059325749662
Lithium (ppm)32.5820462876566
Nitrogen from nitrate (ppm)23.2628881051727
Bismuth (ppm)5.28847102210652
Bromine (ppm)10.7966413151046
Strontium (ppm)3.39888056485591
Arsenic (ppm)4.88243882023617
Vanadium (ppm)3.03500045086016
Rubidium (ppm)3.39888056485591
Molybdenum (ppm)0.581533658017993
Magnesium calcite (%)77.7
Albite (%)15.5
Andesine (%)0
Anorthite (%)0
Anorthoclase (%)0
Muscovite (%)0
Gypsum (%)0
Halite (%)3.9
Quartz (%)2.9
metagenomic1
environmental-sample1
Description

In depth column, depths start from the base of the lake terrace (0 cm) and ascend vertically (up to 95 cm)

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA1076829
Retrieve all samples from this project

Submission
Centro de Astrobiologia, Maria Angeles Lezcano Vega; 2024-02-16
Accession:
SAMN39963393
ID:
39963393

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