Microbe sample from Escherichia coli - BioSample - NCBI

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Microbe sample from Escherichia coli

Identifiers: BioSample: SAMN40022432; Sample name: LACPHL-BACT-2024-00055; SRA: SRS20516683

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: Microbe; version 1.0

Attributes

strain	LACPHL-BACT-2024-00055
host	Homo sapiens
isolation source	blood
collection date	2023-12-14
geographic location	USA: California, Los Angeles County
sample type	whole organism
MLST	No ST predicted
PubMLST scheme	ecoli_achtman_4
AMRFinderPlus AMR core genes	marR_S3N,glpT_E448K,blaKPC-3,erm(B),sul1,aadA5,dfrA17,mph(A)
AMRFinderPlus AMR subclasses	AMPICILLIN/CHLORAMPHENICOL/QUINOLONE/RIFAMPIN/TETRACYCLINE,BETA-LACTAM,CARBAPENEM,EFFLUX,FOSFOMYCIN,MACROLIDE,STREPTOMYCIN,SULFONAMIDE,TRIMETHOPRIM
AMRFinderPlus DB version	2023-04-17.1

BioProject: PRJNA1004324
Retrieve all samples from this project

Submission: LACPHL; 2024-02-21

Accession:: SAMN40022432
ID:: 40022432

BioProject SRA Nucleotide

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