LV_23_samp_4432_10. Kisumu Harbor_2023

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Result Filters

Identifiers: BioSample: SAMN41711419; Sample name: Planktothrix sp._LV_23_10. Kisumu Harbor_2023_1

Organism: Planktothrix sp.
cellular organisms; Bacteria; Bacillati; Cyanobacteriota/Melainabacteria group; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae; Oscillatoriales; Microcoleaceae; Planktothrix; unclassified Planktothrix

Attributes

isolate	samp_4432_concoct_468
isolation source	lake water
collection date	2023-05-29
depth	1m
derived from	SAMN41659692
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.1041 S 34.74074 E
collection method	Van dorn collection
conductivity	180(uS/cm)
dissolved oxygen	4.26mg/L
nitrate	1.995 (ug/L)
pH	6.7
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	10.95(ug/L)
temperature	26.84degree C
total depth of water column	5.4m
total dissolved nitrogen	411(ug/L)
total nitrogen	1470 (ug/L)
total phosphorus	143 (ug/L)
turbidity	22.4NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	98.03
Contamition (%)	2.37
Strain Heterogeneity (%)	92.31
Size (Mbp)	5.373096
No. Of Contigs	520
GC_Content (%)	39.1
N50	18699
file	samp_4432_concoct_468