LV_25_samp_4434_15. Sondu Miriu_2023

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Result Filters

Identifiers: BioSample: SAMN41711434; Sample name: Planktothrix sp._LV_25_15. Sondu Miriu_2023_5

Organism: Planktothrix sp.
cellular organisms; Bacteria; Bacillati; Cyanobacteriota/Melainabacteria group; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae; Oscillatoriales; Microcoleaceae; Planktothrix; unclassified Planktothrix

Attributes

isolate	samp_4434_semibin_67
isolation source	lake water
collection date	2023-05-29
depth	1m
derived from	SAMN41659694
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.3185 S 34.75242 E
collection method	Van dorn collection
conductivity	142.2(uS/cm)
dissolved oxygen	5.95mg/L
nitrate	42.45 (ug/L)
pH	8.5
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	21.45(ug/L)
temperature	26.56degree C
total depth of water column	3.7m
total dissolved nitrogen	1524(ug/L)
total nitrogen	1690 (ug/L)
total phosphorus	176 (ug/L)
turbidity	48.1NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	93.44
Contamition (%)	0.51
Strain Heterogeneity (%)	100
Size (Mbp)	4.48996
No. Of Contigs	314
GC_Content (%)	39.4
N50	19302
file	samp_4434_semibin_67