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LV_1_samp_4307_7. Asembo Bay_2022

Identifiers
BioSample: SAMN41711510; Sample name: Methylocystis sp002412985_LV_1_7. Asembo Bay_2022
Organism
Methylocystis sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Methylocystaceae; Methylocystis; unclassified Methylocystis
Package
MIMAG: metagenome-assembled genome, water; version 6.0
Attributes
isolatesamp_4307_concoct_325
isolation sourcelake water
collection date2022-06-25
depth1m
derived fromSAMN41659670
sample typemetagenomic assembly
metagenome sourcefreshwater metagenome
broad-scale environmental contextlarge freshwater lake biome [ENVO:00000891]
local-scale environmental contextLake [ENVO:00000020]
environmental mediumwater [ENVO:00002006]
geographic locationKenya:Lake Victoria
latitude and longitude0.1961 S 34.38861 E
chlorophyll151.07 (ug/L)
collection method Van dorn collection
conductivity146.4(uS/cm)
dissolved oxygen5.61mg/L
nitrate34.9 (ug/L)
pH7.1
sample collection device or methodVan dorn
sample storage temperature-80 degree C
size fraction selected0.22 micron
soluble reactive phosphorus43(ug/L)
temperature25.5 degree C
total depth of water column5.4 m
turbidity10.1 NTU
metagenomic1
environmental-sample1
geo_loc_meLake Victoria
Completeness(%)87.23
Contamition (%)4.78
Strain Heterogeneity (%)68.18
Size (Mbp)2.116138
No. Of Contigs731
GC_Content (%)48.7
N503412
filesamp_4307_concoct_325
Description

Site 16 Nearshore R1

Keywords: GSC:MIxS;MIMAG:6.0

Submission
University of Michigan, Lauren Hart; 2024-06-06
Accession:
SAMN41711510
ID:
41711510

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