LV_2_samp_4308_7. Asembo Bay_2022

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Result Filters

Identifiers: BioSample: SAMN41711519; Sample name: UBA953 sp._LV_2_7. Asembo Bay_2022

Organism: Verrucomicrobiota bacterium
cellular organisms; Bacteria; Pseudomonadati; PVC group; Verrucomicrobiota; unclassified Verrucomicrobiota

Attributes

isolate	samp_4308_concoct_231
isolation source	lake water
collection date	2022-06-25
depth	1m
derived from	SAMN41659671
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.1961 S 34.38861 E
chlorophyll	151.07 (ug/L)
collection method	Van dorn collection
conductivity	146.4(uS/cm)
dissolved oxygen	5.61mg/L
nitrate	34.9 (ug/L)
pH	7.1
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	43(ug/L)
temperature	25.5degree C
total depth of water column	5.4m
turbidity	10.1NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	76.1
Contamition (%)	12.86
Strain Heterogeneity (%)	30
Size (Mbp)	2.058972
No. Of Contigs	1030
GC_Content (%)	68.5
N50	2152
file	samp_4308_concoct_231