LV_3_samp_4309_8. Ndere Island_2022

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Result Filters

Identifiers: BioSample: SAMN41711529; Sample name: VGZA01 sp._LV_3_8. Ndere Island_2022

Organism: Planctomycetota bacterium
cellular organisms; Bacteria; Pseudomonadati; PVC group; Planctomycetota; unclassified Planctomycetota

Attributes

isolate	samp_4309_concoct_483
isolation source	lake water
collection date	2022-06-25
depth	1m
derived from	SAMN41659672
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.2331 S 34.49639 E
chlorophyll	144.37 (ug/L)
collection method	Van dorn collection
conductivity	140.02(uS/cm)
dissolved oxygen	6.9mg/L
nitrate	26.1 (ug/L)
pH	7.1
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	37.8(ug/L)
temperature	24.8degree C
total depth of water column	6.8m
turbidity	14.1NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	83.79
Contamition (%)	3.45
Strain Heterogeneity (%)	33.33
Size (Mbp)	4.630634
No. Of Contigs	1507
GC_Content (%)	58
N50	3651
file	samp_4309_concoct_483