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LV_11_samp_4317_1. Homa Bay_2022

Identifiers
BioSample: SAMN41711620; Sample name: Nanopelagicus sp016870455_LV_11_1. Homa Bay_2022
Organism
Candidatus Nanopelagicus sp.
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Candidatus Nanopelagicales; Candidatus Nanopelagicaceae; Candidatus Nanopelagicus; unclassified Candidatus Nanopelagicus
Package
MIMAG: metagenome-assembled genome, water; version 6.0
Attributes
isolatesamp_4317_VAMB_261
isolation sourcelake water
collection date2022-06-24
depth1m
derived fromSAMN41659680
sample typemetagenomic assembly
metagenome sourcefreshwater metagenome
broad-scale environmental contextlarge freshwater lake biome [ENVO:00000891]
local-scale environmental contextLake [ENVO:00000020]
environmental mediumwater [ENVO:00002006]
geographic locationKenya:Lake Victoria
latitude and longitude0.5216 S 34.45703 E
chlorophyll74.69 (ug/L)
collection method Van dorn collection
conductivity140.5(uS/cm)
dissolved oxygen5.37mg/L
nitrate23.49477 (ug/L)
nitrite0.124(umol/L)
pH7.4
sample collection device or methodVan dorn
sample storage temperature-80 degree C
silicate129.186(umol/L)
size fraction selected0.22 micron
soluble reactive phosphorus42(ug/L)
temperature26.5degree C
total depth of water column4.1m
total phosphorusND
turbidity19.9NTU
metagenomic1
environmental-sample1
geo_loc_meLake Victoria
Completeness(%)75.93
Contamition (%)11.27
Strain Heterogeneity (%)60.61
Size (Mbp)1.134668
No. Of Contigs484
GC_Content (%)42.4
N503823
filesamp_4317_VAMB_261
Description

Site 9 R1

Keywords: GSC:MIxS;MIMAG:6.0

Submission
University of Michigan, Lauren Hart; 2024-06-06
Accession:
SAMN41711620
ID:
41711620

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