LV_12_samp_4318_1. Homa Bay_2022

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Result Filters

Identifiers: BioSample: SAMN41711621; Sample name: UBA966 sp._LV_12_1. Homa Bay_2022

Organism: Phycisphaerales bacterium
cellular organisms; Bacteria; Pseudomonadati; PVC group; Planctomycetota; Phycisphaerae; Phycisphaerales; unclassified Phycisphaerales

Attributes

isolate	samp_4318_concoct_226
isolation source	lake water
collection date	2022-06-24
depth	1m
derived from	SAMN41659681
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.5216 S 34.45703 E
chlorophyll	74.69 (ug/L)
collection method	Van dorn collection
conductivity	140.5(uS/cm)
dissolved oxygen	5.37mg/L
nitrate	9.19056 (ug/L)
nitrite	0.067(umol/L)
pH	7.4
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
silicate	137.507(umol/L)
size fraction selected	0.22 micron
soluble reactive phosphorus	42(ug/L)
temperature	26.5degree C
total depth of water column	4.1m
total phosphorus	ND
turbidity	19.9NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	82.54
Contamition (%)	5.75
Strain Heterogeneity (%)	57.14
Size (Mbp)	2.404613
No. Of Contigs	992
GC_Content (%)	72.3
N50	2852
file	samp_4318_concoct_226