LV_13_samp_4319_4. Soklo_2022

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Result Filters

Identifiers: BioSample: SAMN41711648; Sample name: Limnohabitans_A sp._LV_13_4. Soklo_2022

Organism: Limnohabitans sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans; unclassified Limnohabitans

Attributes

isolate	samp_4319_metabat2_31
isolation source	lake water
collection date	2022-06-24
depth	1m
derived from	SAMN41659682
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.4525 S 34.41326 E
chlorophyll	130.02 (ug/L)
collection method	Van dorn collection
conductivity	142.1(uS/cm)
dissolved oxygen	6.88mg/L
nitrate	32.4 (ug/L)
pH	7.7
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	38.8(ug/L)
temperature	25.5degree C
total depth of water column	5.6m
turbidity	21.7NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	81.67
Contamition (%)	19.91
Strain Heterogeneity (%)	39.47
Size (Mbp)	3.135711
No. Of Contigs	649
GC_Content (%)	65.3
N50	5810
file	samp_4319_metabat2_31