LV_15_samp_4321_2. Homa Bay Pier_2022

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Result Filters

Identifiers: BioSample: SAMN41711683; Sample name: Rubrivivax sp._LV_15_2. Homa Bay Pier_2022

Organism: Rubrivivax sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Sphaerotilaceae; Rubrivivax; unclassified Rubrivivax

Attributes

isolate	samp_4321_concoct_348
isolation source	lake water
collection date	2022-06-24
depth	1m
derived from	SAMN41659684
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.522 S 34.45441 E
collection method	Van dorn collection
nitrate	7.5654 (ug/L)
nitrite	0.053(umol/L)
pH	7.4
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
silicate	22.418(umol/L)
size fraction selected	0.22 micron
soluble reactive phosphorus	42(ug/L)
temperature	26.9degree C
total depth of water column	2m
total phosphorus	ND
turbidity	21.9NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	80.11
Contamition (%)	6.92
Strain Heterogeneity (%)	42.86
Size (Mbp)	3.585272
No. Of Contigs	1645
GC_Content (%)	68.1
N50	2378
file	samp_4321_concoct_348