LV_17_samp_4323_3. Homa Bay Water Intake_2022

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Result Filters

Identifiers: BioSample: SAMN41711701; Sample name: UBA1268 bacterium_LV_17_3. Homa Bay Water Intake_2022

Organism: Planctomycetia bacterium
cellular organisms; Bacteria; Pseudomonadati; PVC group; Planctomycetota; Planctomycetia; unclassified Planctomycetia

Attributes

isolate	samp_4323_concoct_228
isolation source	lake water
collection date	2022-06-24
depth	1m
derived from	SAMN41659686
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.5214 S 34.45083 E
collection method	Van dorn collection
nitrate	18.14295 (ug/L)
nitrite	0.288(umol/L)
pH	7.1
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
silicate	365.631(umol/L)
size fraction selected	0.22 micron
soluble reactive phosphorus	42(ug/L)
temperature	26.6degree C
total depth of water column	4m
total phosphorus	ND
turbidity	19.6NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	76.37
Contamition (%)	7.24
Strain Heterogeneity (%)	54.55
Size (Mbp)	2.734359
No. Of Contigs	1367
GC_Content (%)	69.1
N50	2158
file	samp_4323_concoct_228