LV_19_samp_4325_H1. Homa Bay Coast_2022

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Result Filters

Identifiers: BioSample: SAMN41711714; Sample name: RFTU01 sp._LV_19_H1. Homa Bay Coast_2022

Organism: Betaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; unclassified Betaproteobacteria

Attributes

isolate	samp_4325_concoct_108
isolation source	lake water
collection date	2022-06-24
depth	1m
derived from	SAMN41659688
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.5216 S 34.45703 E
collection method	Van dorn collection
conductivity	142.3(uS/cm)
dissolved oxygen	10.2mg/L
nitrate	36.2 (ug/L)
pH	7.1
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	42(ug/L)
temperature	26.8degree C
total depth of water column	4.1m
turbidity	NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	90.52
Contamition (%)	4.31
Strain Heterogeneity (%)	23.08
Size (Mbp)	2.620807
No. Of Contigs	839
GC_Content (%)	65.7
N50	3987
file	samp_4325_concoct_108