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LV_22_samp_4332_6. Mbita West_2022

Identifiers
BioSample: SAMN41711759; Sample name: NICIL-2 bacterium_LV_22_6. Mbita West_2022
Organism
Candidatus Kapaibacterium sp.
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Candidatus Kapaibacteriota; Candidatus Kapaibacteriota incertae sedis; Candidatus Kapaibacterium; unclassified Candidatus Kapaibacterium
Package
MIMAG: metagenome-assembled genome, water; version 6.0
Attributes
isolatesamp_4332_concoct_467
isolation sourcelake water
collection date2022-06-24
depth1m
derived fromSAMN41659691
sample typemetagenomic assembly
metagenome sourcefreshwater metagenome
broad-scale environmental contextlarge freshwater lake biome [ENVO:00000891]
local-scale environmental contextLake [ENVO:00000020]
environmental mediumwater [ENVO:00002006]
geographic locationKenya:Lake Victoria
latitude and longitude0.42 S 34.20583 E
chlorophyll49.6875 (ug/L)
collection method Van dorn collection
conductivity99.5(uS/cm)
dissolved oxygen5.61mg/L
nitrateND
pH7.4
sample collection device or methodVan dorn
sample storage temperature-80 degree C
size fraction selected0.22 micron
soluble reactive phosphorus85.4(ug/L)
temperature25.6degree C
total depth of water column2.7m
turbidity5.8NTU
metagenomic1
environmental-sample1
geo_loc_meLake Victoria
Completeness(%)83.25
Contamition (%)2.51
Strain Heterogeneity (%)16.67
Size (Mbp)2.042876
No. Of Contigs594
GC_Content (%)59.8
N504258
filesamp_4332_concoct_467
Description

Site 13 mouth of gulf R2

Keywords: GSC:MIxS;MIMAG:6.0

Submission
University of Michigan, Lauren Hart; 2024-06-06
Accession:
SAMN41711759
ID:
41711759

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