LV_22_samp_4332_6. Mbita West_2022

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Result Filters

Identifiers: BioSample: SAMN41711786; Sample name: Chakrabartia sp009920915_LV_22_6. Mbita West_2022

Organism: Chakrabartia sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Chakrabartia; unclassified Chakrabartia

Attributes

isolate	samp_4332_VAMB_1174
isolation source	lake water
collection date	2022-06-24
depth	1m
derived from	SAMN41659691
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.42 S 34.20583 E
chlorophyll	49.6875 (ug/L)
collection method	Van dorn collection
conductivity	99.5(uS/cm)
dissolved oxygen	5.61mg/L
nitrate	ND
pH	7.4
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	85.4(ug/L)
temperature	25.6degree C
total depth of water column	2.7m
turbidity	5.8NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	99.35
Contamition (%)	1.45
Strain Heterogeneity (%)	100
Size (Mbp)	2.091838
No. Of Contigs	53
GC_Content (%)	58
N50	60522
file	samp_4332_VAMB_1174