LV_24_samp_4433_11. Dunga_2023

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Result Filters

Identifiers: BioSample: SAMN41711823; Sample name: Pirellula_B sp._LV_24_11. Dunga_2023

Organism: Pirellula sp.
cellular organisms; Bacteria; Pseudomonadati; PVC group; Planctomycetota; Planctomycetia; Pirellulales; Pirellulaceae; Pirellula; unclassified Pirellula

Attributes

isolate	samp_4433_VAMB_242
isolation source	lake water
collection date	2023-05-29
depth	1m
derived from	SAMN41659693
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.1539 S 34.7281 E
collection method	Van dorn collection
nitrate	26.015 (ug/L)
pH	7.3
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	9.59(ug/L)
temperature	26.55degree C
total depth of water column	6m
total dissolved nitrogen	676.5(ug/L)
total nitrogen	888 (ug/L)
total phosphorus	74.8 (ug/L)
turbidity	32.6NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	75.05
Contamition (%)	8.58
Strain Heterogeneity (%)	27.27
Size (Mbp)	4.77733
No. Of Contigs	4961
GC_Content (%)	52.5
N50	1180
file	samp_4433_VAMB_242